TOPOLOGY_INFO

controls the printing of information in the topology settings [Edit on GitHub]

Subsections

Keywords

Keyword descriptions

SECTION_PARAMETERS

Type: enum
Default: HIGH
Lone keyword: SILENT
Usage: silent

Description: Level starting at which this property is printed

Valid values:

  • ON

  • OFF

  • SILENT

  • LOW

  • MEDIUM

  • HIGH

  • DEBUG

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ADD_LAST

Type: enum
Default: NO
Usage: ADD_LAST (NO|NUMERIC|SYMBOLIC)

Description: If the last iteration should be added, and if it should be marked symbolically (with lowercase letter l) or with the iteration number. Not every iteration level is able to identify the last iteration early enough to be able to output. When this keyword is activated all iteration levels are checked for the last iteration step.

Valid values:

  • NO Do not mark last iteration specifically

  • NUMERIC Mark last iteration with its iteration number

  • SYMBOLIC Mark last iteration with lowercase letter l

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AMBER_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information when parsing ABER topology files.

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CIF_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information when parsing CIF files.

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COMMON_ITERATION_LEVELS

Type: integer
Default: 0
Usage: COMMON_ITERATION_LEVELS

Description: How many iterations levels should be written in the same file (no extra information about the actual iteration level is written to the file)

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CRD_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information when parsing CRD files.

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FILENAME

Type: string
Default: __STD_OUT__
Usage: FILENAME ./filename

Description: controls part of the filename for output. use __STD_OUT__ (exactly as written here) for the screen or standard logger. use filename to obtain projectname-filename. use ./filename to get filename. A middle name (if present), iteration numbers and extension are always added to the filename. if you want to avoid it use =filename, in this case the filename is always exactly as typed. Please note that this can lead to clashes of filenames.

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G96_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information when parsing G96 files.

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GENERATE_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information regarding topology generation

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GTOP_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information when parsing GROMOS topology files.

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LOG_PRINT_KEY

Type: logical
Default: F
Lone keyword: T
Usage: LOG_PRINT_KEY

Description: This keywords enables the logger for the print_key (a message is printed on screen everytime data, controlled by this print_key, are written)

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PDB_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information when parsing PDB files.

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PSF_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information when parsing PSF files.

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UTIL_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information regarding topology utilities

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XTL_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information when parsing XTL files.

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XYZ_INFO

Type: logical
Default: F
Lone keyword: T

Description: Prints information when parsing XYZ files.

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__CONTROL_VAL

Type: integer
Default: 8

Description: hidden parameter that controls storage, printing,… of the print_key

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